Browse of TCMCG057C40172 protein

CDS

Accession Number	TCMCG057C40172
gbkey	CDS
Protein Id	XP_018443395.1
Location	complement(join(8594965..8595108,8595191..8595337,8595409..8595598,8595692..8595748,8595834..8595937,8596035..8596106,8601133..8601322,8601431..8601487,8601573..8601676,8601774..8601845,8601927..8602045,8602128..8602278,8602366..8602418,8602503..8602548,8602639..8602784,8602875..8602944,8603020..8603173,8603276..8603397,8603509..8603711,8603814..8603868,8604042..8604245))
Gene	LOC108815250
GeneID	108815250
Organism	Raphanus sativus

Protein

Length	819aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018587893.1
Definition	PREDICTED: alpha-L-arabinofuranosidase 2-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	G
Description	Alpha-L-arabinofuranosidase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	R01762        [VIEW IN KEGG]
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG]
KEGG_ko	ko:K01209        [VIEW IN KEGG]
EC	3.2.1.55        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00520        [VIEW IN KEGG] map00520        [VIEW IN KEGG]
GOs	GO:0000272        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004553        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005576        [VIEW IN EMBL-EBI] GO:0005618        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005773        [VIEW IN EMBL-EBI] GO:0005975        [VIEW IN EMBL-EBI] GO:0005976        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009044        [VIEW IN EMBL-EBI] GO:0009056        [VIEW IN EMBL-EBI] GO:0009057        [VIEW IN EMBL-EBI] GO:0009505        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010383        [VIEW IN EMBL-EBI] GO:0010410        [VIEW IN EMBL-EBI] GO:0016052        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016798        [VIEW IN EMBL-EBI] GO:0030312        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044036        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045491        [VIEW IN EMBL-EBI] GO:0045493        [VIEW IN EMBL-EBI] GO:0046556        [VIEW IN EMBL-EBI] GO:0048046        [VIEW IN EMBL-EBI] GO:0071554        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0097599        [VIEW IN EMBL-EBI] GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGATGGACATGAACTGTTCTTGGAAATTTCTGACAAGTGTTTGCATAATATCAATTCTCCTTGGCTCTTGTTCTGCTTACGAGAATGTTTGTCTAGTTGATGCTCAAGAAGACAACGAAAAAAATCAAATGACACTGCAAGTAGATGTTACTAACGCCACAGGACGACCCATTCCTGAAACCCTTTTTGGGATCTTCTTCGAGGAGATCAATCATGCTGGAGCAGGTGGACTGTGGACTGAACTTGTTAACAACAGAGGATTTGAAGCTGGTGGACAAATCATTCCTTCTAGTATCTGGCCTTGGTCCATCATTGGAGATGAATCATCCATATCTGTAGTTACAGACCGTTCTTCATGTTTTGAGCGCAACAAAATTGCACTTAGAATGGAAGTGCTTTGTAGCAGCAATGGTTGTCCATCACAAGGAGTCGGGGTTTATAACCCGGGTTACTGGGGCATGAACATTGAAGAAGGAAAGAAATACAACGTGACCCTTTATGTGCGTTCCACTGGGGACATCAATGTGTCTGTGTCTTTGACAAGCTCGAATGGATCATTGACTCTTGCTTCAGAGCAGATTATAGCTTTGGCTTCTGATGTTTCAAACTGGACAAAGAAGGAAGTGCTTTTGGAGGCAAATGGAACAGATGATGGCGCAAGACTTCAGTTGACAACCACCAAAAGTGGTTCAATATGGTTTGATCAAGTCTCAGCCATGCCCATGGATACTTATAAGGGACATGGTTTTAGGAACGATCTTTTCCAAATGATGGTTGATCTAAAACCCCGTTTCATCCGTTTCCCAGGTGGTTGTTTTGTGGAGGGTGAATGGTTAGGAAACGCATTCCGCTGGAAAGAAACCGTGGGAGCTTGGGAAGAGAGAGCTGGCCACTATGGTGATGTTTGGAAGTACTGGACTGATGATGGTCTTGGCCATTTTGAGTTCTTTCAACTGGCTGAAGATCTCGGTGCAGCTCCAATATGGGTGTTTAACAGTGGAATCAGTCATAATGATCAAGTTGAAACAGCAAGTATCATGCCATTTGTTCAAGAAGCGCTAGATGGTATTGAGTTTGCTCGTGGTGATGCTAATTCAACATGGGGATCAGTTCGAGCTGCAATGGGACATCCAGAGCCTTTTAACCTTGAATATGTTGCGGTCGGGAATGAAGATTGTTGGAACAAATACAGATACTACAAAGGAAACTACCTTGAGTTCTATAATGCAATCAAGAAAGCCTATCCAGACATCAAAATCATCTCCAACTGCGATGGATCGTCTCAACCACTAGATCACCCTGCTGATTACTATGATTATCACGTTTATACTCTTGCCAAGGAGCTATTTTCCATGTCCCATATGTTTGACAAAACATCGCGTGATGGTCCAAAGGCTTTTGTTAGTGAATACGCTGTGAACATAACAGATGCTAATACTGGAAACCTTCTAGCTGCTCTTGGTGAAGCAGGTTTCCTCCTTGGTTTGGAAAAGAACAGTGATGTTGTAGGAATGGTAAGTTATGCACCTCTCTTCGTTAACATAAACGACACAAGGTGGTTGCCAGATGCAATATTTTTCAATTCCTCTCATTTGTATGGAACACCAAGCTATTGGGTCCAACAGTTCTTCACAGAGTCAAGTGGAGCAACTCTTCTCAGCTCTACTCTCCAGGGAGATTCTTCTTATGTTGAAGCATCTGCCATATCCTTCAAAACCAATGGCTCTGATTACATACAGATTAAGGTTTATACTCTTGCCAAGGAGCTATTTTCCATGTCCCATATGTTTGACAAAACATTGCGTGATGGTCCAAAGGCTTTTGTTAGTGAATACGCTGTGAACATAACAGATGCTAATACTGGAAACCTTCTAGCTGCTCTTGGTGAAGCAGGTTTCCTCCTTGGTTTGGAAAAGAACAGTGATGTTGTAGGAATGGTAAGTTATGCACCTCTCTTCGTTAACATAAACGACACAAGGTGGTTGCCAGATGCAATATTTTTCAATTCCTCTCATTTGTATGGAACACCAAGCTATTGGGTCCAACAGTTCTTCACAGAGTCAAGTGGAGCAACTCTTCTCAGCTCTACTCTCCAGGGAGATTCTTCTTATGTTGAAGCATCTGCCATATCCTTCAAAACCAATGGCTCTGATTACATACAGATTAAGGCTGTTAACTTTTCAAACGTAACAGTGGAGCTGAACGTAAAGATGACAGGGTTGAACTCGAGCAAAACAAACGTTTCTGCAACAAAGAAGAAAGTACTTACATCCGCCAATGTGATGGATGAGAACTCTTTCTCTAACCCAGAGATGATTGTGCCACAAGAAAGCTTGCTGGTGATGCCGGAGGGGGACCTGACGTTCGTTCTCCCGCCGTACTCGTTCTCATCATTCGACTTGTTGAAAGAAGCTGCATACACGAAGCTGCCAATATCTGAGTTGACTTCAATACTGTGA

Protein:   MMDMNCSWKFLTSVCIISILLGSCSAYENVCLVDAQEDNEKNQMTLQVDVTNATGRPIPETLFGIFFEEINHAGAGGLWTELVNNRGFEAGGQIIPSSIWPWSIIGDESSISVVTDRSSCFERNKIALRMEVLCSSNGCPSQGVGVYNPGYWGMNIEEGKKYNVTLYVRSTGDINVSVSLTSSNGSLTLASEQIIALASDVSNWTKKEVLLEANGTDDGARLQLTTTKSGSIWFDQVSAMPMDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCFVEGEWLGNAFRWKETVGAWEERAGHYGDVWKYWTDDGLGHFEFFQLAEDLGAAPIWVFNSGISHNDQVETASIMPFVQEALDGIEFARGDANSTWGSVRAAMGHPEPFNLEYVAVGNEDCWNKYRYYKGNYLEFYNAIKKAYPDIKIISNCDGSSQPLDHPADYYDYHVYTLAKELFSMSHMFDKTSRDGPKAFVSEYAVNITDANTGNLLAALGEAGFLLGLEKNSDVVGMVSYAPLFVNINDTRWLPDAIFFNSSHLYGTPSYWVQQFFTESSGATLLSSTLQGDSSYVEASAISFKTNGSDYIQIKVYTLAKELFSMSHMFDKTLRDGPKAFVSEYAVNITDANTGNLLAALGEAGFLLGLEKNSDVVGMVSYAPLFVNINDTRWLPDAIFFNSSHLYGTPSYWVQQFFTESSGATLLSSTLQGDSSYVEASAISFKTNGSDYIQIKAVNFSNVTVELNVKMTGLNSSKTNVSATKKKVLTSANVMDENSFSNPEMIVPQESLLVMPEGDLTFVLPPYSFSSFDLLKEAAYTKLPISELTSIL